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National Taiwan University
Avatar of NengChien Wang.
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Senior Software Engineer @DOINT
2021 ~ 2023
Software engineer, Image Processing engineer, Algorithm engineer
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control (DVC) MLOps Image Processing PCA Interactive Segmentation Connected Component Image Stitching Direct Linear Transformation Kalman Filter (Tracking) SIFT Hough HoG Image Deblurring Depth Estimation ISP Machine Learning Framework Transformation Data Augmentation Transfer Learning Model Pruning Model Quantization Performance Evaluation Parameter Fine-tuning Model : SVM, LeNet, AlexNet, VGG, GoogLeNet, SSD, YOLO, MobileNet, ShuffleNet, FaceNet, Xception, MatrixNet, CenterNet, CSPNet, M2Det, EfficientNet/Det Projects HPC Keyword Spotting Automatic Speech Recognition Distributed Inference System Social Distancing Estimation (Lidar) Object Tracking Object Detection Automatic License Plate Recognition Optical Character Recognition (OCR) Multi-Camera Object Tracking (Image Stitching) Voice Keywords Detection Face Recognition Blur
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National Taiwan University
Communication Engineering
Avatar of Andrea Chuang.
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Avatar of Andrea Chuang.
Offline
Director, Lab of next-generation sequencing @Stork Fertility Center
2018 ~ Present
RD
Within three months
Medical Lab Taiwan Genomics and Genetics Society (TGGS) Technologist, Reporting and Issuing Int Medical Technologist American Society for Clinical Pathology (ASCP) Medical Technologist (ASCPi) Education National Taiwan University, Graduate institute of clinical medicine Doctor of Philosophy • FebMar 2024 Research Topic: Mitochondria, Regression models, Machine learning New South Wales University (Australia), Graduate school of biomedical engineering Master exchange • JunJun 2011 Research Topic: Perlecan purification and analysis (Human colorectal cance model) National Taiwan University, Graduate institute of Clinical Laboratory Master of Medical technology •Research Topic: Acute leukemia, Erythroblastosis, Telomeres National Taiwan University, Clinical Laboratory and Medical Science Bachelor of...
Employed
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Full-time / Not interested in working remotely
10-15 years
National Taiwan University
canditate, Graduate institute of Clinical medicine

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Director of NGS laboratory, PhD candidate of clinical medicine, Medical technologist
Logo of Stork Fertility Center.
Stork Fertility Center
2018 ~ Present
Hsinchu, Hsinchu City, Taiwan
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10-15 years
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National Taiwan University
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canditate, Graduate institute of Clinical medicine
Print

Tzu-Hsuan (Andrea) Chuang

   Medical Laboratory Director - management and certification

   Medical Research Head - clinical Research, Statistics

   ISO 15189/LDTs Accredition , SCI publication

   Tel: 0919-345-595     Email: [email protected]

Work Experience

Director, Lab of next-generation sequencing             

Stork Fertility Center  •  Jun 2018 - Present

Laboratory management: budget plan, personnel training, QC/QA, complaint handling

Major service: preimplantation genetic testing, expanded carrier screening

Honor: Mission accomplishment award (2018 Corporate Annual Group Award)

Head of Medical Research                                             

Stork Fertility Center  •  Jun 2017 - Present

Clinical trials: project plan, statistical skills (STATA, SPSS), IRB approval, academic hospitals collaboration

Data warehouse: data cleaning, outcome visualization, regression models, SCI publications (~1 per year)

Honor: Precision Medicine Award (2017 Corporate Annual Individual Award) 

Senior Medical Technologist of NGS Lab                   

Stork Fertility Center  •  Oct 2014 - Jun 2018

NGS execution: testing conduction, pipeline tunning, annotation, issuing reports

Consultation: reproductive genetics

Honor: Oral presentation (2017 European Society of Human Reproduction and Embryology, ESHRE) 

Reproductive healthcare consultant

Stork Fertility Center  •  Mar 2013 - Oct 2014

Case relationship management: IVF procedures, medication education, follow-up care

Artificial reproductive technique: semen analysis and processing for insemination

Honor: Founder's Award (2016 Corporate Annual Group Award)

Assistant embryologist

Honji Fertility Center  •  Feb 2012 - Feb 2013

Semen analysis, human embryo culture, artificial insemination, mouse embryo model

Professional Certification


ISO 15189 Medical Lab

Taiwan Accreditation Foundation (TAF)

 Lab Director, Auditor 

LDTs Medical Lab

Taiwan Genomics and Genetics Society (TGGS)

Technologist, Reporting and Issuing

Int Medical Technologist

American Society for Clinical Pathology (ASCP)

Medical Technologist (ASCPi)


Education

National Taiwan University, Graduate institute of clinical medicine

Doctor of Philosophy  •  Feb 2021 - Mar 2024

Research Topic: Mitochondria, Regression models, Machine learning

New South Wales University (Australia), Graduate school of biomedical engineering

Master exchange  •  Jun 2010 - Jun 2011

Research Topic: Perlecan purification and analysis (Human colorectal cance model)

National Taiwan University, Graduate institute of Clinical Laboratory

Master of Medical technology  •  2008 - 2010

Research Topic: Acute leukemia, Erythroblastosis, Telomeres

National Taiwan University, Clinical Laboratory and Medical Science

Bachelor of Medical technology  •  2004 - 2008

Medical technologist training, National medical license

Project management

Medical testing

2023 ISO 15189/LDTs Accredition

2022 Service launch: Expanded carrier screening

2020 NGS upgrade: Two NGS parallel clinical trial

2017 System change: NGS vs. aCGH parallel clinical trial

2014 Molecular biology lab setup

Data warehouse

2023 LIS upgrade: Automization QC metrices of NGS

2021 Reporting system: Automization report generation

2020 LIS setup: Automization LIS

2019 KPI system: Embryo lab, molecular biology lab

2018 Clinical database: EMR establishment

Publications  https://orcid.org/0000-0003-4263-9374

Clinical strategy

Using an Interpretable Machine Learning Model to Predict Corifollitropin Alfa Protocol. Fertility & Reproduction. 2023;5:50-60. Lai HH, Kuo EE, Li RS, Chuang TH, Huang YC, Hsieh JY, Chang TA, Huang YL, Hsieh WT, Su YR, and Liu M. (AI healthcare model)

A Patient Friendly Corifollitropin Alfa Protocol without Routine Pituitary Suppression in Normal Responders. PLoS One. 2016;11(4):e0154123. Lai HH, Kuo EE, Li RS, Chuang TH, Huang YC, Hsieh JY, Chang TA, Huang YL, Hsieh WT, Su YR, and Liu M. (Prize paper)

Clinical embryology

Reduced mitochondrial DNA content correlates with poor clinical outcomes in cryotransfers with day 6 single euploid embryos. Front Endocrinol. 2023;13:1066530. Chuang TH, Chen CY, Kuan CS, Lai HH, Hsieh CL, Lee MJ, Liang YT, Chang YJ, Chen CY, Chen SU.

Concordance between different trophectoderm biopsy sites and the inner cell mass of chromosomal composition measured with a next-generation sequencing platform. Mol Hum Reprod. 2018;24:593-601. Chuang TH, Hsieh JY, Lee MJ, Lai HH, Hsieh CL, Wang HL, Chang YJ, Chen SU.

Reproductive genetics

High concordance in preimplantation genetic testing for aneuploidy between automatic identification via Ion S5 and manual identification via Miseq. Sci Rep. 2021b;11:18931. Chuang TH, Wu ZH, Kuan CS, Lee MJ, Hsieh CL, Wang HL, Lai HH, Chang YJ, Chen SU.

The incidence of mosaicism for individual chromosomes in human blastocysts is correlated with chromosome length. Front Genet. 2021a;11:565348. Chuang TH, Chang YP, Lee MJ, Wang HL, Lai HH, Chen SU.

Identification of mosaic and segmental aneuploidies by next-generation sequencing in preimplantation genetic screening can improve clinical outcomes compared to array-comparative genomic hybridization. Mol Cytogenet. 2017:10:14. Lai HH, Chuang TH, Wong LK, Lee MJ, Hsieh CL, Wang HL, Chen SU.

Presentation

Incorporating PGT-A in the IVF Program: An IVF Center Perspective. 2022 Asia Pacific Initiative on Reproduction Masterclass

High concordance between Ion Represeq system and Veriseq system. 2021 Asia Pacific Reproductive Health Webinar

Which accumulation is better in poor ovarian responders stratified by POSEIDON, egg or blastocyst? 2020 European Society of Human Reproduction (ESHRE)– Oral (Virtual)

Per oocyte-based efficiency in cryopreserved oocyte bank: how many donated eggs are enough? 2019 Asia Pacific Initiative on Reproduction Congress (ASPIRE) – Oral (Hong Kong, China)

Elective single embryo transfer in oocyte donation IVF: strategy, outcome, and efficiency. 2018 Asia Pacific Initiative on Reproduction Congress (ASPIRE) – Oral (Taipei, Taiwan)

Mosaicism across individual chromosome in trophectoderm biopsies by next generation sequencing: changes with chromosome length. 2017 European Society of Human Reproduction (ESHRE)– Oral (Geneva, Switzerland)

Resume
Profile

Tzu-Hsuan (Andrea) Chuang

   Medical Laboratory Director - management and certification

   Medical Research Head - clinical Research, Statistics

   ISO 15189/LDTs Accredition , SCI publication

   Tel: 0919-345-595     Email: [email protected]

Work Experience

Director, Lab of next-generation sequencing             

Stork Fertility Center  •  Jun 2018 - Present

Laboratory management: budget plan, personnel training, QC/QA, complaint handling

Major service: preimplantation genetic testing, expanded carrier screening

Honor: Mission accomplishment award (2018 Corporate Annual Group Award)

Head of Medical Research                                             

Stork Fertility Center  •  Jun 2017 - Present

Clinical trials: project plan, statistical skills (STATA, SPSS), IRB approval, academic hospitals collaboration

Data warehouse: data cleaning, outcome visualization, regression models, SCI publications (~1 per year)

Honor: Precision Medicine Award (2017 Corporate Annual Individual Award) 

Senior Medical Technologist of NGS Lab                   

Stork Fertility Center  •  Oct 2014 - Jun 2018

NGS execution: testing conduction, pipeline tunning, annotation, issuing reports

Consultation: reproductive genetics

Honor: Oral presentation (2017 European Society of Human Reproduction and Embryology, ESHRE) 

Reproductive healthcare consultant

Stork Fertility Center  •  Mar 2013 - Oct 2014

Case relationship management: IVF procedures, medication education, follow-up care

Artificial reproductive technique: semen analysis and processing for insemination

Honor: Founder's Award (2016 Corporate Annual Group Award)

Assistant embryologist

Honji Fertility Center  •  Feb 2012 - Feb 2013

Semen analysis, human embryo culture, artificial insemination, mouse embryo model

Professional Certification


ISO 15189 Medical Lab

Taiwan Accreditation Foundation (TAF)

 Lab Director, Auditor 

LDTs Medical Lab

Taiwan Genomics and Genetics Society (TGGS)

Technologist, Reporting and Issuing

Int Medical Technologist

American Society for Clinical Pathology (ASCP)

Medical Technologist (ASCPi)


Education

National Taiwan University, Graduate institute of clinical medicine

Doctor of Philosophy  •  Feb 2021 - Mar 2024

Research Topic: Mitochondria, Regression models, Machine learning

New South Wales University (Australia), Graduate school of biomedical engineering

Master exchange  •  Jun 2010 - Jun 2011

Research Topic: Perlecan purification and analysis (Human colorectal cance model)

National Taiwan University, Graduate institute of Clinical Laboratory

Master of Medical technology  •  2008 - 2010

Research Topic: Acute leukemia, Erythroblastosis, Telomeres

National Taiwan University, Clinical Laboratory and Medical Science

Bachelor of Medical technology  •  2004 - 2008

Medical technologist training, National medical license

Project management

Medical testing

2023 ISO 15189/LDTs Accredition

2022 Service launch: Expanded carrier screening

2020 NGS upgrade: Two NGS parallel clinical trial

2017 System change: NGS vs. aCGH parallel clinical trial

2014 Molecular biology lab setup

Data warehouse

2023 LIS upgrade: Automization QC metrices of NGS

2021 Reporting system: Automization report generation

2020 LIS setup: Automization LIS

2019 KPI system: Embryo lab, molecular biology lab

2018 Clinical database: EMR establishment

Publications  https://orcid.org/0000-0003-4263-9374

Clinical strategy

Using an Interpretable Machine Learning Model to Predict Corifollitropin Alfa Protocol. Fertility & Reproduction. 2023;5:50-60. Lai HH, Kuo EE, Li RS, Chuang TH, Huang YC, Hsieh JY, Chang TA, Huang YL, Hsieh WT, Su YR, and Liu M. (AI healthcare model)

A Patient Friendly Corifollitropin Alfa Protocol without Routine Pituitary Suppression in Normal Responders. PLoS One. 2016;11(4):e0154123. Lai HH, Kuo EE, Li RS, Chuang TH, Huang YC, Hsieh JY, Chang TA, Huang YL, Hsieh WT, Su YR, and Liu M. (Prize paper)

Clinical embryology

Reduced mitochondrial DNA content correlates with poor clinical outcomes in cryotransfers with day 6 single euploid embryos. Front Endocrinol. 2023;13:1066530. Chuang TH, Chen CY, Kuan CS, Lai HH, Hsieh CL, Lee MJ, Liang YT, Chang YJ, Chen CY, Chen SU.

Concordance between different trophectoderm biopsy sites and the inner cell mass of chromosomal composition measured with a next-generation sequencing platform. Mol Hum Reprod. 2018;24:593-601. Chuang TH, Hsieh JY, Lee MJ, Lai HH, Hsieh CL, Wang HL, Chang YJ, Chen SU.

Reproductive genetics

High concordance in preimplantation genetic testing for aneuploidy between automatic identification via Ion S5 and manual identification via Miseq. Sci Rep. 2021b;11:18931. Chuang TH, Wu ZH, Kuan CS, Lee MJ, Hsieh CL, Wang HL, Lai HH, Chang YJ, Chen SU.

The incidence of mosaicism for individual chromosomes in human blastocysts is correlated with chromosome length. Front Genet. 2021a;11:565348. Chuang TH, Chang YP, Lee MJ, Wang HL, Lai HH, Chen SU.

Identification of mosaic and segmental aneuploidies by next-generation sequencing in preimplantation genetic screening can improve clinical outcomes compared to array-comparative genomic hybridization. Mol Cytogenet. 2017:10:14. Lai HH, Chuang TH, Wong LK, Lee MJ, Hsieh CL, Wang HL, Chen SU.

Presentation

Incorporating PGT-A in the IVF Program: An IVF Center Perspective. 2022 Asia Pacific Initiative on Reproduction Masterclass

High concordance between Ion Represeq system and Veriseq system. 2021 Asia Pacific Reproductive Health Webinar

Which accumulation is better in poor ovarian responders stratified by POSEIDON, egg or blastocyst? 2020 European Society of Human Reproduction (ESHRE)– Oral (Virtual)

Per oocyte-based efficiency in cryopreserved oocyte bank: how many donated eggs are enough? 2019 Asia Pacific Initiative on Reproduction Congress (ASPIRE) – Oral (Hong Kong, China)

Elective single embryo transfer in oocyte donation IVF: strategy, outcome, and efficiency. 2018 Asia Pacific Initiative on Reproduction Congress (ASPIRE) – Oral (Taipei, Taiwan)

Mosaicism across individual chromosome in trophectoderm biopsies by next generation sequencing: changes with chromosome length. 2017 European Society of Human Reproduction (ESHRE)– Oral (Geneva, Switzerland)